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Table 3 The 50 genes with largest fold change between tabw2 and control mice in liver

From: Gene expression profiles of a mouse congenic strain carrying an obesity susceptibility QTL under obesigenic diets

Probe set ID

Symbol

Gene name

Chr

Fold

Up-regulated in tabw2

 1444438_at

Cib3

Calcium and integrin binding family member 3

8

4.89

 1423257_at

Cyp4a14

Cytochrome P450, family 4, subfamily a, polypeptide 14

4

3.75

 1455308_at

Tmem16f

Transmembrane protein 16F

15

3.02

 1453462_at

Chst13

Carbohydrate (chondroitin 4) sulfotransferase 13

6

2.92

 1452005_at

Dlat

Dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)

9

2.89

 1437239_x_at

Phc2

Polyhomeotic-like 2 (Drosophila)

4

2.77

 1449641_at

Adk

Adenosine kinase

14

2.75

 1422076_at

Acot4

Acyl-CoA thioesterase 4

12

2.68

 1447227_at

Slc40a1

Solute carrier family 40 (iron-regulated transporter), member 1

1

2.61

 1438969_x_at

Dhx30

DEAH (Asp-Glu-Ala-His) box polypeptide 30

9

2.56

 1449770_x_at

Tmem191c

Transmembrane protein 191C

16

2.56

 1438617_at

Serpina7

Serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7

X

2.53

 1420357_s_at

Xlr3a

X-linked lymphocyte-regulated 3A

X

2.52

 1431805_a_at

Rhpn2

Rhophilin, Rho GTPase binding protein 2

7

2.46

 1417280_at

Slc17a1

Solute carrier family 17 (sodium phosphate), member 1

13

2.45

 1438660_at

Gcnt2

Glucosaminyl (N-acetyl) transferase 2, I-branching enzyme

13

2.45

 1451822_a_at

Scrn2

Secernin 2

11

2.45

 1418524_at

Pcm1

Pericentriolar material 1

8

2.43

 1438487_s_at

Zzz3

Zinc finger, ZZ domain containing 3

3

2.42

 1448385_at

Slc15a4

Solute carrier family 15, member 4

5

2.41

 1437983_at

Sall1

Sal-like 1 (Drosophila)

8

2.37

 1422077_at

Acot4

Acyl-CoA thioesterase 4

12

2.35

 1441141_at

Amn1

Antagonist of mitotic exit network 1 homolog (S. cerevisiae)

6

2.33

 1426350_at

Mgat2

Mannoside acetylglucosaminyltransferase 2

12

2.32

 1444810_at

Acaca

Acetyl-Coenzyme A carboxylase alpha

11

2.29

Down-regulated in tabw2

 1421447_at

Onecut1

One cut domain, family member 1

9

3.57

 1452431_s_at

H2-Aa

Histocompatibility 2, class II antigen A, alpha

17

3.43

 1453007_at

3110082I17Rik

RIKEN cDNA 3110082I17 gene

5

2.67

 1421571_a_at

Ly6c

Lymphocyte antigen 6 complex, locus C

15

2.62

 1457619_at

BC015286

cDNA sequence BC015286

8

2.44

 1417025_at

H2-Eb1

Histocompatibility 2, class II antigen E beta

17

2.38

 1456524_at

Nrg1

Neuregulin 1

8

2.37

 1439256_x_at

Tm 7sf1

Transmembrane 7 superfamily member 1

13

2.36

 1422754_at

Tmod1

Tropomodulin 1

4

2.33

 1424186_at

2610001E17Rik

RIKEN cDNA 2610001E17 gene

16

2.28

 1447870_x_at

1110002E22Rik

RIKEN cDNA 1110002E22 gene

3

2.25

 1450839_at

D0H4S114

DNA segment, human D4S114

18

2.17

 1432620_at

Ttn

Titin

2

2.05

 1428549_at

Ccdc3

Coiled-coil domain containing 3

2

1.98

 1425167_a_at

Gngt1

Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1

6

1.97

 1455307_at

BC037112

cDNA sequence BC037112

5

1.97

 1423028_at

Ifna2

Interferon alpha family, gene 2

4

1.92

 1421226_at

Trem2

Triggering receptor expressed on myeloid cells 2

17

1.85

 1425358_at

Riok1

RIO kinase 1 (yeast)

13

1.85

 1457023_at

5830411G16Rik

RIKEN cDNA 5830411G16 gene

6

1.83

 1427048_at

Smo

Smoothened homolog (Drosophila)

6

1.81

 1450068_at

Baz1b

Bromodomain adjacent to zinc finger domain, 1B

5

1.80

 1429144_at

Prei4

Preimplantation protein 4

2

1.80

 1456093_at

Zfp536

Zinc finger protein 536

7

1.77

 1450843_a_at

Serpinh1

Serine (or cysteine) peptidase inhibitor, clade H, member 1

7

1.73

  1. Chr chromosome