Table 4 Differentially expressed genes between tabw2 and control mice in liver and adipose tissue (fat) that are located within the congenic interval on chromosome 6
Probe set ID | Symbol | Gene name | Mb | Tissue | Fold |
|---|---|---|---|---|---|
1441727_s_at | Zfp467 | Zinc finger protein 467 | 48.4 | Fat | −1.85 |
1434043_a_at | Repinl | Replication initiator 1 | 48.5 | Fat | −1.73 |
1424375_s_at | Gimap4 | GTPase, IMAP family member 4 | 48.6 | Fat | 1.64 |
1420365_a_at | Hnrpa2b1 | Heterogeneous nuclear ribonucleoprotein A2/B1 | 51.4 | Liver | −1.16 |
1428922_at | 1200009O22Rik | RIKEN cDNA 1200009O22 gene | 53.8 | Fat | −2.20 |
1434016_at | Znrf2 | Zinc and ring finger 2 | 54.8 | Fat | 1.77 |
1444735_at | Liver | −1.28 | |||
1423784_at | Gars | Glycyl-tRNA synthetase | 55.0 | Liver | −1.26 |
1418697_at | Inmt | Indolethylamine N-methyltransferase | 55.1 | Fat | 2.26 |
1418656_at | Lsm5 | LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) | 56.7 | Liver | −1.23 |
1457023_at | 5830411G16Rik | Riken cDNA 5830411G16 gene | 56.7 | Liver | 1.83 |
1432026_a_at | Herc5 | Hect domain and RLD 5 | 57.4 | Liver | 1.32 |
1429194_at | Tigd2 | Tigger transposable element derived 2 | 59.2 | Liver | −1.41 |
1449519_at | Gadd45a | Growth arrest and DNA-damage-inducible 45 alpha | 67.0 | Liver | −1.74 |
1427860_at | LOC100047162 | Similar to Ig kappa chain V–V region MPC11 precursor | 70.4 | Fat | 1.54 |
1425335_at | Cd8a | CD8 antigen, alpha chain | 71.3 | Fat | 1.96 |
1443830_x_at | Rnf103 | Ring finger protein 103 | 71.5 | Liver | −1.39 |
1420289_at | T25656 | Expressed sequence T25656 | 71.6 | Liver | 1.11 |
1424716_at | Restsat | Retinol saturase (all trans retinol 13, 14 reductase) | 72.5 | Liver | −1.58 |
1450117_at | Tcf3 | Transcription factor 3 | 72.6 | Fat | −1.64 |
1448895_a_at | Ctnna2 | Catenin (cadherin associated protein), alpha 2 | 76.8 | Liver | 1.38 |
1432286_at | Pole4 | Polymerase (DNA-directed), epsilon 4 (p12 subunit) | 82.6 | Liver | 1.26 |
1423371_at | Fat | 3.11 | |||
1436618_at | Sfxn5 | Sideroflexin 5 | 85.2 | Liver | −1.67 |
1432969_at | 4933423K11Rik | RIKEN cDNA 4933423K11 gene | 85.3 | Liver | 1.09 |
1418013_at | Cml1 | Camello-like 1 | 85.9 | Fat | −1.51 |
1447277_s_at | Pcyox1 | Prenylcysteine oxidase 1 | 86.3 | Liver | −1.27 |
1418229_s_at | Nfu1 | NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) | 87.0 | Liver | −1.32 |
1453132_a_at | Gkn2 | Gastrokine2 | 87.3 | Liver | 1.38 |
1459728_at | Isy1 | ISY1 splicing factor homolog (S. cerevisiae) | 87.8 | Fat | −2.46 |
Liver | −1.35 | ||||
1416244_a_at | Cnbp | Cellular nucleic acid binding protein | 87.8 | Liver | −1.17 |
1416585_at | Ruvbl1 | RuvB-like protein 1 | 88.4 | Liver | −1.30 |
1442560_at | Mgll | Monoglyceride lipase | 88.7 | Liver | −2.01 |
1453462_at | Chst13 | Carbohydrate (chondroitin 4) sulfotransferase 13 | 90.3 | Liver | −2.92 |
1451229_at | Hdac11 | Histone deacetylase 11 | 91.1 | Liver | −1.27 |
1456879_at | C130022K22Rik | RIKEN cDNA C130022K22 gene | 91.8 | Liver | −1.50 |
1416911_a_at | 6330407G11Rik | RIKEN cDNA 6330407G11 gene | 92.0 | Liver | −2.10 |
1449194_at | Mrps25 | Mitochondrial ribosomal protein S25 | 92.1 | Liver | −1.24 |
1439933_at | B430316J06Rik | RIKEN cDNA B430316J06 gene | 93.9 | Liver | −1.74 |
1443231_at | AW544 786 | Expressed sequence tag | 94.2 | Fat | −2.22 |
1433671_at | A130022J15Rik | RIKEN cDNA A130022J15 gene | 97.1 | Liver | 1.49 |
1452123_s_at | Frmd4b | FERM domain containing 4B | 97.2 | Liver | −1.83 |
1426594_at | Fat | 1.34 | |||
1421111_at | Rybp | RING1 and YY1 binding protein | 100.1 | Liver | 1.18 |
1428137_at | Arl8b | ADP-ribosylation factor-like 8b | 108.7 | Liver | −1.50 |
1443954_at | Rad18 | RAD18 homolog (S. cerevisiae) | 112.6 | Fat | 1.27 |
1423189_at | 6720456B07Rik | RIKEN cDNA 6720456B07 gene | 113.5 | Liver | −1.37 |
1444806_at | AK054191 | Expressed sequence tag | 113.5 | Fat | 1.98 |
1447147_at | AI747732 | Expressed sequence tag | 114.8 | Fat | 3.46 |
1440028_at | 4631423B10Rik | RIKEN cDNA 4631423B10 gene | 114.8 | Fat | −1.70 |
1437677_at | AI449595 | Expressed sequence tag | 114.9 | Liver | 1.11 |
1416078_s_at | Rafl | v-Raf-1 leukemia viral oncogene 1 | 115.5 | Liver | −1.37 |
1440384_at | Tmccl | Transmembrane and coiled-coil domains 1 | 115.9 | Liver | −1.94 |
Fat | −1.88 | ||||
1417574_at | Cxcl12 | Chemokine (C-X-C motif) ligand 12 | 117.1 | Fat | 2.25 |
1436359_at | Ret | Ret proto-oncogene | 118.1 | Fat | −3.46 |
1422602_a_at | Wnt5b | Wingless-related MMTV integration site 5B | 119.3 | Liver | 1.19 |
1417407_at | Fbxl14 | F-box and leucine-rich repeat protein 14 | 119.4 | Liver | −1.50 |
1424247_at | Ercl | ELKS/RAB6-interacting/CAST family member 1 | 119.5 | Fat | −1.71 |
1434221_at | BC030863 | cDNA sequence BC030863 | 120.8 | Liver | −1.20 |
1425951_a_at | Clec4n | C-type lectin domain family 4, member n | 123.1 | Fat | 1.68 |
1426770_at | Pex5 | Peroxisome biogenesis factor 5 | 124.3 | Liver | −1.33 |
1422106_a_at | Spsb2 | SplA/ryanodine receptor domain and SOCS box containing 2 | 124.7 | Fat | −1.12 |
1455215_at | C530028O21Rik | RIKEN cDNA C530028O21 gene | 124.9 | Fat | −3.92 |
1455785_at | Kcnal | Potassium voltage-gated channel, shaker-related subfamily, member 1 | 126.5 | Fat | 1.26 |
1448229_s_at | Ccnd2 | Cyclin D2 | 127.0 | Fat | 4.67 |
1434745_at | Liver | −1.69 | |||
1460245_at | Klrdl | Killer cell lectin-like receptor, subfamily D, member 1 | 129.5 | Fat | 3.39 |
1446155_at | AK078025 | Expressed sequence tag | 133.0 | Fat | 2.32 |
1415968_a_at | Kap | Kidney androgen-regulated protein | 133.7 | Fat | −2.87 |
1440982_at | BB209400 | Expressed sequence tag | 134.0 | Fat | −1.23 |
1451022_at | Lrp6 | Low density lipoprotein receptor-related protein 6 | 134.4 | Fat | −1.92 |
Liver | −1.29 | ||||
1435085_at | Crebl2 | CAMP responsive element binding protein-like 2 | 134.8 | Liver | −1.39 |
1434045_at | Cdkn1b | Cyclin-dependent kinase inhibitor 1B | 134.8 | Liver | −1.89 |
1426454_at | Arhgdib | Rho, GDP dissociation inhibitor (GDI) beta | 136.8 | Liver | 1.58 |