Table 3 The 16 most differentially expressed genes of the total 218 differentially expressed genes (P < 0.01) after the oat bran meal, compared with the control meal, as analysed by the Meal Content Model. (Mean values with their standard errors, n = 10)
Gene name | Probe set identifier | Gene symbol | Fold change | SEM | P-value |
|---|---|---|---|---|---|
Down-regulated | |||||
Ubiquitin-specific peptidase 5 | 230083_at | USP53 | 0.62 | 0.05 | <0.0001 |
Inhibitor of DNA binding 3, dominant negative helix-loop-helix protein | 207826_s_at | ID3 | 0.66 | 0.05 | 0.0001 |
Noggin precursor | 231798_at | NOG | 0.67 | 0.06 | 0.0006 |
Hypothetical LOC29092 similar to HSPC157 | 219865_at | AL031281.6 | 0.68 | 0.07 | 0.0022 |
Uncharacterized protein C4orf16 | 219023_at | C4orf16 | 0.71 | 0.08 | 0.0065 |
T-cell receptor beta V gene segment | NuGO_eht0356506_x_at | TRBV5-1 | 0.74 | 0.05 | 0.0005 |
cAMP-dependent protein kinase inhibitor alpha | 204612_at | PKIA | 0.75 | 0.06 | 0.0031 |
IL-4-R mRNA for the interleukin 4 receptor | 242743_at | IL4R | 0.76 | 0.06 | 0.0031 |
Up-regulated | |||||
Signal-regulatory protein beta 1 | 206934_at | SIRPB1 | 1.51 | 0.13 | 0.0001 |
Caldesmon 1 | 212077_at | CALD1 | 1.49 | 0.17 | 0.0024 |
Protein MRVI1 | 230214_at | MRVI1 | 1.47 | 0.14 | 0.0006 |
Interleukin-18 precursor (IL-18) | 206295_at | IL18 | 1.46 | 0.17 | 0.0050 |
Truncated zinc finger protein isoform | 242210_at | ZNF24 | 1.41 | 0.15 | 0.0055 |
SWI/SNF complex 170 KDa subunit (BAF170) | 1561973_at | SMARCC2 | 1.39 | 0.16 | 0.0089 |
Ring finger protein, transmembrane 1 | 221195_at | RNFT1 | 1.38 | 0.12 | 0.0024 |
Glutathione S-transferase Mu 2 | 204418_x_at | GSTM2 | 1.38 | 0.14 | 0.0069 |