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Table 1 Comparison of gene expression ratios in response to rom4 treatment as determined by microarray analysis and RT-qPCR in colon cancer cell lines SW480 and HT29

From: Effect of rosemary polyphenols on human colon cancer cells: transcriptomic profiling and functional enrichment analysis

Gene symbol

SW480

HT29

Microarray

qPCR

Microarray

qPCR

FCa

p valueb

FCa

p valuec

FCa

p valueb

FCa

p valuec

HMOX1

24.6

0.0000001

141.6

0.030

3.0

0.0003202

4.0

<0.001

OSGIN1

3.6

0.0003437

13.3

0.035

3.1

0.0014385

5.6

<0.001

DUSP1

11.4

0.0000004

39.5

0.035

2.5

0.0006308

3.0

<0.001

ARRDC3

7.7

0.0000013

15.2

<0.001

5.0

0.0000195

4.6

<0.001

MUC1

1.0

0.7230161

0.7

0.624

0.4

0.0035951

0.3

<0.001

  1. aFold change (expression ratio)
  2. bAdjusted p value (FDR)
  3. cStatistical significance calculated by REST
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Genes & Nutrition

ISSN: 1865-3499

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