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Table 1 Genomic characteristics of the SNP markers used in the analysis

From: Genotype patterns at CLU, CR1, PICALM and APOE, cognition and Mediterranean diet: the PREDIMED-NAVARRA trial

Gene_chr-band

SNPs

bp

Alleles

MA

MAF

p for Hardy–Weinberg equilibrium*

OR

95 % CI

CLU_8p21.1

rs11136000

27,520,436

C/T

T

0.4

0.84

0.86

0.81–0.90

CR1_1q32.2

rs3818361

205,758,672

G/A

A

0.2

0.77

1.21

1.14–1.29

PICALM_11q14.2

rs3851179

85,546,288

C/T

T

0.37

0.12

0.86

0.81–0.92

  1. The PREDIMED-NAVARRA cognitive study
  2. SNP single nucleotide polymorphisms, bp base pair physical position from the March 2006 human reference sequence (NCBI Build 36.1) produced by the International Human Genome Sequencing Consortium, MA allele with the minimum frequency, MAF minimum allele frequency, OR odd ratios, 95 % CI 95 % confidence interval
  3. * Chi-square test for testing the Hardy–Weinberg equilibrium in the PREDIMED-NAVARRA study population