Gene | Affymetrix probe ID | TNF versus untreated | PF versus TNF | PF versus untreated | |||
---|---|---|---|---|---|---|---|
P_val | FC | P_val | FC | P_val | FC | ||
Activation of NF-κB | |||||||
NFKB1 | 11717542_a_at | 6.7E−06 | 2.77 | 8.6E−04 | −1.54 | 1.6E−04* | 1.8 |
NFKBIA | 11757894_x_at | 2.1E−03 | 3.7 | 2.7E−01* | −1.36 | 7.6E−03* | 2.71 |
NFKBIA | 11745878_x_at | 2.5E−03 | 3.26 | 2.3E−01* | −1.37 | 1.1E−02* | 2.37 |
NFKBIA | 11744000_a_at | 2.6E−03 | 3.54 | 2.4E−01* | −1.4 | 1.1E−02* | 2.53 |
NFKBIE | 11743007_at | 3.1E−05 | 4.07 | 5.2E−02* | −1.36 | 1.2E−04 | 3 |
TNF | 11721577_at | 1.1E−05 | 4.77 | 1.0E−03 | −2.01 | 3.3E−04 | 2.37 |
TNFRSF10B | 11719681_a_at | 9.1E−08 | 2.72 | 4.9E−01* | −1.02 | 1.1E−07 | 2.65 |
TNFRSF10B | 11753075_a_at | 1.7E−06 | 1.92 | 9.4E−02* | 1.07 | 9.2E−07 | 2.06 |
Positive regulation of IkB kinase/NF-κB cascade | |||||||
IKBKE | 11720956_a_at | 4.6E−05 | 2.29 | 3.1E−03* | −1.46 | 1.3E−03* | 1.57 |
IKBKE | 11720957_a_at | 4.1E−06 | 2.48 | 8.1E−05 | −1.72 | 7.0E−04* | 1.44 |
TNFSF10 | 11743730_at | 1.6E−07 | 3.29 | 1.3E−05 | −1.76 | 7.4E−06* | 1.87 |
TNFSF10 | 11747952_x_at | 7.8E−10 | 3.71 | 8.4E−08 | −1.82 | 3.0E−08 | 2.04 |
TNFAIP3 | 11718940_a_at | 2.5E−05 | 3.82 | 3.5E−03* | −1.71 | 4.5E−04 | 2.23 |
TNFAIP3 | 11718939_s_at | 3.8E−05 | 7.8 | 2.0E−02* | −1.82 | 2.7E−04 | 4.27 |
TRAF2 | 11754185_a_at | 1.5E−05 | 1.74 | 1.3E−04 | −1.46 | 7.5E−03* | 1.19 |
NF-κB-responsive genes | |||||||
ICAM1 | 11747499_a_at | 8.3E−04 | 2.13 | 4.7E−02* | −1.36 | 1.0E−02* | 1.57 |
ICAM1 | 11732999_a_at | 2.6E−05 | 4.15 | 6.9E−03* | −1.65 | 3.0E−04 | 2.52 |
ICAM1 | 11733000_at | 9.4E−05 | 4.72 | 3.4E−03* | −2.2 | 4.0E−03* | 2.14 |
IL-8 | 11754026_a_at | 9.3E−05 | 37.31 | 4.0E−01* | −1.43 | 1.7E−04 | 26.15 |
IL-8 | 11763226_x_at | 1.3E−04 | 30.75 | 3.9E−01* | −1.44 | 2.4E−04 | 21.31 |
IL-8 | 11718841_s_at | 5.9E−07 | 40.96 | 9.4E−02* | −1.4 | 1.0E−06 | 29.21 |
Other factors | |||||||
FOS | 11749291_a_at | 3.0E−04 | −2.83 | 1.2E−03 | 2.23 | 1.4E−01* | −1.27 |
FOS | 11734659_a_at | 1.4E−03 | −2.34 | 4.2E−03* | 1.98 | 3.1E−01* | −1.18 |
FOS | 11749852_s_at | 9.5E−04 | −2.35 | 4.2E−03* | 1.89 | 1.8E−01* | −1.24 |
RELB | 11722141_at | 1.3E−06 | 4.23 | 1.6E−03 | −1.51 | 9.6E−06 | 2.8 |
IL-1A | 11725198_at | 7.1E−05 | 1.92 | 3.3E−02* | −1.2 | 4.6E−04* | 1.59 |
LTB | 11739658_a_at | 6.6E−05 | 1.99 | 1.6E−03* | −1.47 | 4.8E−03* | 1.36 |
LTB | 11739657_a_at | 9.1E−05 | 6.8 | 3.4E−03* | −2.63 | 3.8E−03* | 2.58 |
NFAT5 | 11738447_a_at | 8.5E−04 | −2.07 | 1.0E−02* | 1.55 | 5.1E−02* | −1.33 |
NFAT5 | 11717466_a_at | 9.2E−03 | −3.62 | 1.0E−01* | 1.93 | 1.2E−01* | −1.87 |
TNIP1 | 11750133_x_at | 1.0E−03 | 1.78 | 5.1E−03* | −1.52 | 1.5E−01* | 1.17 |
TNIP1 | 11715898_a_at | 2.9E−04 | 1.86 | 1.7E−03 | −1.56 | 7.8E−02* | 1.19 |
TNIP1 | 11744745_a_at | 3.8E−03 | 1.58 | 8.1E−03* | −1.48 | 5.2E−01* | 1.07 |
TNIP1 | 11744746_x_at | 3.6E−03 | 1.54 | 2.8E−03* | −1.57 | 8.2E−01* | −1.02 |
ROCK1 | 11739450_x_at | 6.7E−05 | −1.94 | 1.7E−02* | 1.25 | 6.3E−04* | −1.55 |