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Table 2 Lead variants associated with fish intake frequency

From: Identification of the 12q24 locus associated with fish intake frequency by genome-wide meta-analysis in Japanese populations

SNP

Chr

Position

Gene(s)

EA

NEA

EAF

Beta

SE (beta)

P association

I 2

P heterogeneity

rs11758482

6

2,438,231

GMDS–C6orf195

G

A

0.405

0.110

0.024

3.8 × 10−6

49.8

0.05

rs12003047

9

25,527,621

IZUMO3–TUSC1

C

T

0.015

0.431

0.097

8.7 × 10−6

53.3

0.04

rs11066015

12

112,168,009

ACAD10

A

G

0.265

− 0.174

0.027

5.4 × 10−11

0.0

0.65

rs1201914

20

59,274,641

CDH26–CDH4

G

A

0.452

− 0.117

0.023

4.8 × 10−7

0.0

0.49

  1. SNP single nucleotide polymorphism, Chr chromosome, EA effect allele, NEA non-effect allele, EAF effect allele frequency, SE standard error
  2. Chromosomal positions are according to the human genome assembly version GRCh37/hg19
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Genes & Nutrition

ISSN: 1865-3499

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