Table 5 RNA-seq raw reads and alignment statistics
From: Effects of excess sugars and lipids on the growth and development of Caenorhabditis elegans
Sample | Raw reads | Clean reads | Effective rate (%) | Mapped reads |
|---|---|---|---|---|
control1 | 50,336,050 | 48,764,876 | 96.88 | 43,352,156 (88.90%) |
control2 | 49,994,812 | 48,856,706 | 97.72 | 45,434,034 (92.99%) |
control3 | 50,088,084 | 48,972,324 | 97.77 | 45,512,779 (92.94%) |
ste-1 | 48,696,160 | 47,424,710 | 97.39 | 43,953,321 (92.68%) |
ste-2 | 50,009,082 | 48,789,968 | 97.56 | 40,675,401 (83.37%) |
ste-3 | 50,196,514 | 48,923,924 | 97.46 | 45,264,387 (92.52%) |
suc-1 | 50,044,436 | 48,988,090 | 97.89 | 45,545,343 (92.97%) |
suc-2 | 50,055,244 | 48,774,494 | 97.44 | 45,533,711 (93.36%) |
suc-3 | 50,551,938 | 49,389,884 | 97.70 | 45,949,651 (93.03%) |
suc-ste-1 | 50,571,890 | 48,518,192 | 95.94 | 38,579,733 (79.52%) |
suc-ste-2 | 49,972,024 | 48,652,742 | 97.36 | 44,991,273 (92.47%) |
suc-ste-3 | 50,202,968 | 48,652,232 | 96.91 | 45,044,386 (92.58%) |
suc-ste-res-1 | 50,200,070 | 48,738,076 | 97.09 | 44,851,851 (92.03%) |
suc-ste-res-2 | 50,045,552 | 48,493,072 | 96.90 | 44,766,163 (92.31%) |
suc-ste-res-3 | 50,122,198 | 48,604,166 | 96.97 | 44,858,281 (92.29%) |