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Table 6 Haplotype analysis of GC gene in PTB patients and controls

From: Association of vitamin D pathway genes polymorphisms with pulmonary tuberculosis susceptibility in a Chinese population

Haplotype PTB patients [n (%)] Controls [n (%)] P value OR (95% CI)
rs7041-rs3733359-rs16847024-rs4588
 AACG 123.94 (12.6) 122.66 (12.5) 0.916 1.014 (0.776, 1.326)
 AATG 93.08 (9.5) 126.88 (13.0) 0.016 0.706 (0.531, 0.938)
 AGCG 198.01 (20.2) 165.20 (16.9) 0.053 1.255 (0.997, 1.579)
 AGCT 317.50 (32.4) 296.95 (30.4) 0.297 1.108 (0.914, 1.343)
 CACG 47.17 (4.8) 65.29 (6.7) 0.080 0.709 (0.482, 1.044)
 CGCG 160.45 (16.4) 165.10 (16.9) 0.792 0.968 (0.763, 1.230)
  1. Global χ2 is 11.832, df=5 (frequency<0.03 in both control and case has been dropped)
  2. Fisher’s p value is 0.037