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Table 6 Relative expression ratio of the eight genes validated by real-time PCR in mice at T2 in response to the HF diet

From: The nutrigenomic investigation of C57BL/6N mice fed a short-term high-fat diet highlights early changes in clock genes expression

Gene name

Cecum

Liver

Fold changea (HF/CTR)

SE range

P value

Fold changea (HF/CTR)

SE range

P value

Aryl hydrocarbon receptor nuclear translocator–like (Arntl) or brain muscle Arnt-like-1 (Bmal1)

↓↓ (0.303)

0.202–0.584

0.002

↓↓↓ (0.053)

0.026–0.089

<0.001

Thyrotroph embryonic factor (Tef)

↑↑↑ (4.926)

3.538–7.028

<0.001

↑↑ (11.146)

6.505–18.958

0.002

Hepatic leukemia factor (Hlf)

↑↑ (4.533)

3.228–9.696

0.001

↑↑ (2.920)

2.048–4.620

0.003

Nuclear receptor subfamily 1, group D, member 2 (Nr1d2) or Rev-erbß

↑↑ (3.112)

2.073–5.300

0.001

↑↑ (4.666)

2.284–8.304

0.003

Nuclear factor, interleukin 3, regulated (Nfil3) or E4 promoter-binding protein 4 (E4BP4)

↓↓↓ (0.352)

0.167–0.674

<0.001

↓↓↓ (0.180)

0.112–0.294

<0.001

Circadian locomotor output cycles kaput (Clock)

–b

–

0.343

↓↓↓ (0.401)

0.292–0.546

<0.001

Cryptochrome 1 (photolyase-like) (Cry1)

–b

–

0.890

–b

–

0.185

Peroxisome proliferator activated receptor alpha (PPARα)

–b

–

0.73

↑ (1.620)

1.007–2.322

0.021

  1. Data were statistically analyzed by the software REST 2008 (relative expression software tool; [26]; http://rest.gene-quantification.info/)
  2. aValues are means, n = 6. Arrows indicate the direction and significance level of the difference from control: 1 arrow, 0.01 ≤ P < 0.05; 2 arrows, 0.001 ≤ P < 0.01; 3 arrows, P < 0.001. Fold changes indicate the gene expression difference in mice at T2 induced by the high-fat diet relative to the control diet
  3. bNot different from the CTR, P > 0.05