Transcriptomic profile adaptations following exposure of equine satellite cells to nutriactive phytochemical gamma-oryzanol

Szcześniak, K. A.; Ciecierska, A.; Ostaszewski, P.; Sadkowski, T.

doi:10.1186/s12263-016-0523-5

Table 2 List of differentially expressed genes in GO-treated vs. CTRL equine satellite cells—microarray analysis (FDR ≤ 0.05, fold change ≥1.3, n = 4)

From: Transcriptomic profile adaptations following exposure of equine satellite cells to nutriactive phytochemical gamma-oryzanol

No.	Gene symbol	Regulation	FC	Corr. p value	Description	Accession number
1.	il-1r2	Up	3.1	0.040	Interleukin-1 receptor type II	[NM_001081816]
2.	efhc2	Up	3.0	0.049	EF-hand domain (C-terminal) containing 2	[ENSECAT00000017638]
3.	tcrd	Up	2.2	0.050	T cell receptor delta	[L38389]
4.	tfap2e	Up	1.8	0.039	Transcription factor AP-2 epsilon (activating enhancer-binding protein 2 epsilon)	[ENSECAT00000003183]
5.	cdca7	Up	1.7	0.027	Cell division cycle associated 7	[ENSECAT00000012017]
6.	f2rl2	Up	1.6	0.048	Coagulation factor II (thrombin) receptor-like 2	[ENSECAT00000010830]
7.	rcor2	Up	1.5	0.026	REST corepressor 2	[ENSECAT00000024786]
8.	lrrc16a	Up	1.5	0.049	Leucine-rich repeat containing 16A	[ENSECAT00000026357]
9.	mapk14	Up	1.5	0.037	Mitogen-activated protein kinase 14	[XM_005604060]
10.	fezf2	Up	1.4	0.029	FEZ family zinc finger 2	[ENSECAT00000022391]
11.	colec12	Up	1.4	0.026	Collectin subfamily member 12	[XM_005604060]
12.	pir	Up	1.4	0.038	Pirin (iron-binding nuclear protein)	[ENSECAT00000014292]
13.	gja1	Up	1.4	0.048	Gap junction protein 1	[ENSECAT00000005498]
14.	itpr2	Up	1.4	0.05	Inositol 1,4,5-trisphosphate receptor, type 2	[ENSECAT00000009891]
15.	tmem107	Up	1.3	0.045	Transmembrane protein 107	[ENSECAT00000014966]
16.	steap1	Up	1.3	0.045	6 transmembrane epithelial antigen of the prostate (metalloreductase)	[ENSECAT00000024982]
17.	alcam	Up	1.4	0.045	Activated leukocyte cell adhesion molecule	[XM_005602026]
18.	musk	Down	−1.3	0.042	Muscle, skeletal, receptor tyrosine kinase	[ENSECAT00000010687]
19.	exoc6	Down	−1.3	0.044	Exocyst complex component 6	[ENSECAT00000025821]
20.	sept6	Down	−1.3	0.036	Septin 6	[XM_005614469]
21.	mdh2	Down	−1.3	0.039	Malate dehydrogenase 2, NAD (mitochondrial)	[NM_001195526]
22.	nexn	Down	−1.3	0.039	Nexilin (F-actin-binding protein)	[ENSECAT00000016039]
23.	setd7	Down	−1.3	0.026	SET domain containing lysine methyltransferase 7	[ENSECAT00000020466]
24.	tmem47	Down	−1.3	0.045	Transmembrane protein 47	[XM_008544808]
25.	bdnf	Down	−1.3	0.027	Brain-derived neurotrophic factor	[NM_001081787]
26.	snca	Down	−1.3	0.038	Synuclein, alpha (non A4 component of amyloid precursor)	[ENSECAT00000016509]
27.	actg2	Down	−1.4	0.045	Actin, gamma 2, smooth muscle, enteric	[ENSECAT00000020181]
28.	btg1	Down	−1.4	0.039	B cell translocation gene 1, antiproliferative	[ENSECAT00000022009]
29.	znf423	Down	−1.5	0.045	Zinc finger protein 423	[ENSECAT00000000207]
30.	aqp1	Down	−1.5	0.027	Aquaporin 1	[XM_003364834]
31.	bcl2l11	Down	−1.5	0.035	BCL2-like 11 (apoptosis facilitator)	[ENSECAT00000023850]
32.	nr2f2	Down	−1.5	0.040	Nuclear receptor subfamily 2, group F, member 2	[ENSECAT00000008488]
33.	pak1	Down	−1.5	0.050	CDC42 effector protein (Rho GTPase binding) 3	[ENSECAT00000019645]
34.	cryab	Down	−1.5	0.035	Crystallin, alpha B	[ENSECAT00000012936]
35.	abra	Down	−1.5	0.045	Actin-binding Rho-activating protein	[ENSECAT00000016765]
36.	capn6	Down	−1.5	0.038	Calpain 6	[ENSECAT00000011583]
37.	herpud1	Down	−1.5	0.045	Homocysteine-inducible, endoplasmic reticulum stress-inducible (ubiquitin-like domain member 1)	[JL623642]
38.	tmcc3	Down	−1.6	0.033	Transmembrane and coiled-coil domain family 3	[ENSECAT00000012141]
39.	tbc1d8	Down	−1.6	0.027	TBC1 domain family, member 8 (with GRAM domain)	[ENSECAT00000013116]
40.	kiaa1958	Down	−1.6	0.045	Protein-coding gene	[ENSECAT00000008002]
41.	neo1	Down	−1.6	0.038	Neogenin 1	[ENSECAT00000026822]
42.	lrrn1	Down	−1.6	0.045	Leucine-rich repeat neuronal 1	[ENSECAT00000002791]
43.	ctrc	Down	−1.6	0.044	Chymotrypsin C (caldecrin)	[XM_008540961]
44.	itgb1bp2	Down	−1.6	0.048	Integrin beta 1-binding protein (melusin) 2	[ENSECAT00000016364]
45.	stk17b	Down	−1.6	0.039	Serine/threonine kinase 17b (apoptosis-inducing)	[JL616416]
46.	hist1h4a	Down	−1.6	0.045	Chromosome 4 open reading frame 21	[ENSECAT00000006145]
47.	camta1	Down	−1.6	0.039	Calmodulin binding transcription activator 1	[ENSECAT00000022451]
48.	kcnk12	Down	−1.7	0.033	Potassium channel, subfamily K, member 12	[XM_008530912]
49.	phactr3	Down	−1.7	0.035	Phosphatase and actin regulator 3	[ENSECAT00000008448]
50.	mllt3	Down	−1.7	0.044	Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	[ENSECAT00000025395]
51.	tgfb2	Down	−1.8	0.038	Transforming growth factor, beta 2	[ENSECAT00000017826]
52.	scd5	Down	−2.0	0.038	Stearoyl-CoA desaturase 5	[ENSECAT00000015537]
53.	myf5	Down	−2.0	0.039	Myogenic factor 5	[ENSECAT00000021416]
54.	garem	Down	−2.0	0.039	GRB2 associated, regulator of MAPK1	[ENSECAT00000012124]
55.	duoxa2	Down	−2.2	0.026	Dual oxidase maturation factor 2	[ENSECAT00000015499]
56.	ncald	Down	−2.2	0.044	Neurocalcin delta	[XM_005613237]
57.	kcnmb2	Down	−2.5	0.036	Potassium large conductance calcium-activated channel, subfamily M, beta member 2	[ENSECAT00000009305]
58.	hla-dqb1	Down	−5.0	0.028	Major histocompatibility complex, class II, DQ beta I	[XM_008506652]

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