Sample sets (subjects) | Mean allelic frequency (95% CI)* | Distribution pattern# | |||||
---|---|---|---|---|---|---|---|
EUR | EAS | AFR | p | r2 | |||
VDR | |||||||
rs886441 | 60 (2356) | 0.18 (0.16–0.21) | 0.05 (0.02–0.07) | 0.41 (0.38–0.43) | 1.66e–27 | 0.88 | EUR ≠ AFR ≠ EAS |
rs2283342 | 60 (2356) | 0.26 (0.22–0.29) | 0.49 (0.43–0.55) | 0.00 (− 0.04–0.05) | 6.70e–19 | 0.76 | EUR ≠ AFR ≠ EAS |
rs2107301 | 60 (2356) | 0.32 (0.29–0.35) | 0.67 (0.63–0.70) | 0.13 (0.10–0.16) | 1.91e–30 | 0.91 | EUR ≠ AFR ≠ EAS |
rs4334089 | 60 (2356) | 0.73 (0.68–0.77) | 0.57 (0.52–0.61) | 0.35 (0.30–0.39) | 1.95e–16 | 0.71 | EUR ≠ AFR ≠ EAS |
rs4516035 | 60 (2355) | 0.43 (0.41–0.45) | 0.03a (0.00–0.05) | 0.03a (0.01–0.05) | 3.68e–34 | 0.93 | EUR ≠ AFR and EAS |
RXRα | |||||||
rs1805343 | 45 (1853) | 0.66a (0.63–0.69) | 0.65a (0.63–0.68) | 0.17 (0.14–0.19) | 6.81e–29 | 0.95 | AFR ≠ EUR and EAS |
rs1805352 | 44 (1822) | 0.69a (0.66–0.72) | 0.75a (0.72–0.78) | 0.26 (0.23–0.29) | 2.82e–27 | 0.95 | AFR ≠ EUR and EAS |
rs10881582 | 46 (1881) | 0.74a (0.71–0.77) | 0.81a (0.78–0.83) | 0.25 (0.22–0.28) | 1.04e–30 | 0.96 | AFR ≠ EUR and EAS |
rs3118571 | 45 (1854) | 0.65a (0.62–0.68) | 0.69a (0.66–0.72) | 0.12 (0.09–0.15) | 9.27e–30 | 0.96 | AFR ≠ EUR and EAS |
rs3818740 | 45 (1853) | 0.40a,b,c (0.29–0.52) | 0.43a,b,c (0.32–0.53) | 0.59a,b,c (0.48–0.70) | 3.85e–02 | 0.10 | - |
rs731516 | 45 (1852) | 1.00a (0.98–1.02) | 1.00a (0.98–1.02) | 0.59 (0.57–0.61) | 1.20e–31 | 0.96 | AFR ≠ EUR and EAS |
rs7040434 | 45 (1854) | 0.00a (− 0.01–0.02) | 0.00a (− 0.01–0.01) | 0.53 (0.52–0.54) | 4.26e–44 | 0.99 | AFR ≠ EUR and EAS |
RXRγ | |||||||
rs283695 | 60 (2356) | 0.44 (0.40–0.47) | 0.77a (0.73–0.80) | 0.85a (0.82–0.89) | 8.45e–25 | 0.85 | EUR ≠ AFR and EAS |
rs12069160 | 60 (2356) | 0.94a (0.92–0.96) | 0.65 (0.62–0.67) | 0.92a (0.90–0.95) | 2.69e–24 | 0.85 | EAS ≠ AFR and EUR |
rs10800098 | 60 (2345) | 0.05a (0.02–0.08) | 0.33 (0.30–0.36) | 0.03a (0.00–0.06) | 8.40e–21 | 0.80 | EAS ≠ AFR and EUR |
rs10489745 | 60 (2343) | 0.09a (0.07–0.12) | 0.42 (0.40–0.45) | 0.03a (0.01–0.05) | 3.57e–33 | 0.92 | EAS ≠ AFR and EUR |