Skip to main content
Download PDF

Genetic association between FADS and ELOVL polymorphisms and the circulating levels of EPA/DHA in humans: a scoping review

Genes & Nutrition volume 19, Article number: 11 (2024) Cite this article

Abstract

Background

Docosahexaenoic acid (DHA) and eicosapentaenoic acid (EPA) are two omega-3 fatty acids that can be synthesized out of their precursor alpha-linolenic acid (ALA). FADS and ELOVL genes encode the desaturase and elongase enzymes required for EPA and DHA synthesis from ALA; however, single nucleotide polymorphisms (SNPs) in FADS and ELOVL genes could modify the levels of EPA and DHA synthesized from ALA although there is no consensus in this area. This review aims to investigate EPA and DHA circulating levels in human blood and their association with FADS or ELOVL.

Methods

PubMed, Cochrane, and Scopus databases were used to identify research articles. They were subsequently reviewed by two independent investigators.

Results

Initially, 353 papers were identified. After removing duplicates and articles not meeting inclusion criteria, 98 full text papers were screened. Finally, this review included 40 studies investigating FADS and/or ELOVL polymorphisms. A total of 47 different SNPs in FADS genes were reported. FADS1 rs174537, rs174547, rs174556 and rs174561 were the most studied SNPs, with minor allele carriers having lower levels of EPA and DHA. SNPs in the FADS genes were in high linkage disequilibrium. SNPs in FADS were correlated with levels of EPA and DHA. No conclusion could be drawn with the ELOVL polymorphisms since the number of studies was too low.

Conclusion

Specific SNPs in FADS gene, such as rs174537, have strong associations with circulating levels of EPA and DHA. Continued investigation regarding the impact of genetic variants related to EPA and DHA synthesis is warranted.

Introduction

Omega-3 fatty acids (ω3) are defined as long chain polyunsaturated fatty acids (LC-PUFA) with 18 or more carbons in length and three or more double bonds [1], where the first double bound is on the third carbon from the methyl end of the acyl chain [2]. Eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) are the two main ω3 LC-PUFA studied in the prevention and treatment of a wide range of diseases [3,4,5,6]. Higher plasma EPA and DHA levels are usually associated with lower risks of cognitive decline [7, 8] and cardiovascular diseases [9, 10]. EPA and DHA plasma levels are modified by dietary consumption of marine foods, endogenous production of these fatty acids from their essential precursor fatty acid, alpha-linolenic acid (ALA). The synthesis of EPA and DHA from ALA requires sequential enzymatic steps depicted in Fig. 1, and involves desaturation by enzymes encoded by fatty acid desaturase 1 (FADS1) and 2 (FADS2) genes and elongation via enzymes called elongases encoded by very long chain fatty acids 2 (ELOVL2) and 5 (ELOVL5) genes [11]. Elongases are encoded by the ELOVL gene family located on chromosome 6 [12] (Fig. 1). To date, seven different ELOVL genes have been identified in humans [13, 14]. ELOVL5 is identified as being involved in elongating fatty acids of C18 --» C20 carbons, whereas ELOVL2 elongates C20 --» C24 fatty acids (Fig. 1) [15]. Desaturation steps are mediated by the enzymes delta-5-desaturase (D5D) and delta-6-desaturase (D6D), which are encoded by FADS1 and FADS2 genes, respectively. The FADS1 and FADS2 genes are located on human chromosome 11, in a head-to-head arrangement (q12 and q13.1), interspersed by an 11kb region. Another fatty acid desaturase gene, known as FADS3, is also located in this FADS gene cluster; however, its translated product has not yet been characterized [16]. D6D catalyzes the conversion of ALA into stearidonic acid. An elongation step follows, after which D5D adds a double bond to a 20-carbon fatty acid chain. Eicosatetraenoic acid is then transformed into EPA, via the action of D5D.

Fig. 1
figure 1

Metabolic pathway of EPA and DHA biosynthesis from ALA via desaturation and elongation steps

Full size image

Some of the coauthors previously investigated the conversion rate in humans in studies using uniformly labeled carbon 13-ALA, where it was estimated that the rate of conversion of ALA into EPA was ~5% and into DHA was ~0.5 % [17]. The conversion rates can, however, differ depending on sex, age, and menopausal status [18,19,20,21]. Dietary intake of ALA, EPA and DHA can also modify the plasma levels of EPA and DHA. In one study, pregnant women who reported consuming foods high in EPA and DHA had higher concentrations of these fatty acids in their blood [22]. In a randomised controlled trial on men and women consuming controlled intakes of 0.25, 0.5, and 1 g/d, blood levels of EPA and DHA increased linearly in whole blood, erythrocytes, and plasma phospholipids with increasing intakes of EPA and DHA [23]. Linoleic acid (LA) can also influence the biosynthesis of EPA and DHA from ALA by competing with ALA as a substrate for the same enzymes, FADS and ELOVL [24, 25]. One study showed that a low-LA diet increased the conversion of ALA into EPA and DHA by upregulating the expression of FADS and ELOVL through regulating the expression of transcription factors such as peroxisome proliferator-activated receptor-alpha (PPAR-α) and sterol regulatory element binding protein 1 (SREBP1) [24].

There are other non-modifiable factors that can contribute to lower conversion rate, such as single nucleotide polymorphisms (SNPs) in FADS and ELOVL genes. FADS genes are highly polymorphic with 35 490 single nucleotide polymorphisms (SNPs) located in this gene cluster, as described in the SNP database by the National Center for Biotechnology Information (NCBI) [26]. The search was conducted for each gene individually, and the cumulative sum of single nucleotide variants for FADS1, FADS2, and FADS3 was calculated. Among these SNPs, there were 1306 missense and nonsense variants (stop gained)-resulting in a change in the translation of proteins [27].

Previous reviews on SNPs in FADS and ELOVL focussed on investigating the relationships between these genes and disease risk factors/disease prevalence or were specifically interested in the levels of cholesterol in different lipoproteins (HDL, LDL, VLDL, etc.) [28,29,30,31]. The objective of this scoping review was to examine studies that investigated EPA and DHA blood levels in relation to FADS and ELOVL polymorphisms to estimate their potential contribution to variations in the levels of ω3 LC-PUFA in the bloodstream.

Methods

A search for studies was conducted in PubMed, Cochrane, and Scopus between March 7th, 2022, and December 21st, 2022 using the following database-specific indexed keywords: "docosahexaenoic acid", "eicosapentaenoic acid", "fatty acids, omega 3", "polymorphism, single nucleotide", "polymorphism, genetic", "SNPs" , "fatty acids, omega 3/metabolism", "fatty acids, omega 3/biosynthesis", "fatty acid desaturases", "fatty acid elongases", "ELOVL", "FADS" , "Elongase, Fatty Acid" ,"Desaturase, Fatty Acid" , "single nucleotide polymorphism" , "SNP", Eicosapentaenoate" , "Docosahexaenoate" , "omega3" , "polyunsaturated fatty acids" , "omega 3 PUFA" , and "omega 3 fatty acids".

For this review paper, only studies performed in humans were considered. All articles and abstracts were carefully screened by IL. Inclusion criteria were as follows: articles written in English, availability of genetic information for FADS and/or ELOVL genes, availability of EPA and DHA data either in total plasma, red blood cells (RBC), serum or in different blood compartments such as plasma phospholipids. Studies conducted on maternal milk, umbilical cord venous plasma, or only reporting the calculation of desaturase and elongase indices using product-to-precursor ratios were excluded. Additionally, studies including a supplement or a specific diet in the study were only considered if they presented baseline levels of ω3 LC-PUFA in their data, otherwise they were excluded. Afterwards, eligibility of the selected studies was assessed by IL and MP. Moreover, additional papers were identified from the reference list of relevant articles.

Results

A total of 353 studies were found in the initial search. Duplicates were eliminated from the list, and a further 221 studies were removed because they did not meet inclusion criteria. A total of 98 full-text papers was assessed from which 40 articles were selected for this review (Fig. 2).

Fig. 2
figure 2

Literature review flowchart

Full size image

The publication dates of the selected studies ranged from 2006 to 2021, with most studies published after 2017 (n = 17 studies). Studies were conducted in different age groups including infants, adolescents, adults, and older adults together with pregnant women and post-menopausal women. In addition, participants had different medical histories, ranging from no health issues to participants with heart diseases, type 2 diabetes (T2D), cognitive impairments, psychiatric disorders, obesity, or metabolic syndrome. The selected studies were conducted in various countries around the world: Australia, Brazil, Canada, China, Costa Rica, Denmark, England, France, Germany, Italy, Japan, Mexico, Mahe-island, Netherlands, Poland, Czechia, and South Korea,

The number of participants in the different studies ranged from 12 [32] to 4457 [33], and the mean age ranged from 9 months old [34] to 85 years [35]. There were 22 studies reporting an association between SNPs in FADS /ELOVL and EPA/DHA levels.

FADS genetic polymorphisms and EPA/DHA status in blood pools

EPA/DHA were studied in relation to FADS polymorphisms in 39 studies (Table 1). Of these, 17 studies reported significant associations between SNPs and EPA levels, and 12 studies with DHA levels. In general, individuals carrying minor (rare) alleles in the FADS genes tended to have lower levels of circulating EPA and/or DHA [2, 32,33,34, 36,37,38,39,40,41,42,43,44,45,46,47,48,49,50]. However, two studies reported the opposite relationship [51, 52]. These two studies were conducted in China where the minor allele carriers of FADS1 rs174537 (T) had higher levels of DHA than those carrying the major allele (G) [51, 52]. Altogether, about half of the included studies reported an association between polymorphisms in FADS genes and the levels of ω3 LC-PUFA in blood. Figure 3 summarizes all the SNPs found in the selected studies. Green nodes represent SNPs associated with EPA, blue nodes represent SNPs associated with DHA, orange nodes are for the SNPs associated with both EPA and DHA at least in one study and grey is for no reported associations.

Table 1 Studies investigating the association between FADS /ELOVL genetic polymorphisms and EPA/ DHA levels in blood
Full size table
Fig. 3
figure 3

List of studied SNPs in FADS / ELOVL genes in the selected studies

Full size image

FADS1 gene

Among the 39 studies, 11 SNPs in the FADS1 gene were reported: rs174533, rs174537, rs174544, rs174545, rs174546, rs174547, rs174548, rs174553, rs174556, rs174561, and rs174568 (Fig. 3). For rs174533, the authors reported DHA levels only [44]. All other SNPs were associated with EPA levels, although this result was not consistently found in all studies. In contrast, only 6 SNPs were associated with DHA levels. Among the different studied SNPs, FADS1-rs174544 and rs174568 were investigated in one paper only [43] and will therefore not be discussed further since the results were not independently validated.

Figure 4 summarizes the studies reporting significant associations between SNPs and EPA levels, and Fig. 5 summarizes those with DHA levels. The majority of FADS1 SNPs were in strong linkage disequilibrium (LD), except for rs174548, which displayed LD coefficients < 0.8 with rs174533, rs174537, rs174544, rs174545, rs174546, rs174547, rs174553, rs174556, rs174561, and rs174568 (Fig. 6) as established with LDlink.

Fig. 4
figure 4

List of studies with an association between FADS / ELOVL genetic polymorphisms and EPA levels

Full size image
Fig. 5
figure 5

List of studies with an association between FADS / ELOVL genetic polymorphisms and DHA levels

Full size image
Fig. 6
figure 6

Pairwise linkage disequilibrium D’ and R2 plots of the FADS SNPs associated with EPA/DHA in selected studies

Full size image

Regarding the other SNPs in the FADS1 gene, 11 studies investigated the rs174537 polymorphism. In all these studies, (G) was the major allele and (T) the minor allele. The minor allele frequencies differed by populations and varied between 0.3 in Europeans to 0.45 in east Asians [52]. FADS1- rs174537 was in high LD (R2 > 0.8) with 10 SNPs in the FADS1 gene and 6 SNPs in the FADS2 gene (Fig. 6). Five studies showed that individuals carrying the minor (T) allele in rs174537 had lower EPA levels in plasma [37, 42, 48, 51] and serum [32] compared to those carrying the major G allele. However, seven studies did not report such an association [53,54,55,56,57,58]. Blood DHA was also associated with rs174537 in three independent studies [42, 51, 52]. In a healthy cohort used by Hilal et al., 2013 [42], minor allele carriers had lower levels of DHA in plasma, while in two other independent papers in East Asians with coronary artery disease and Type 2 diabetes [51, 52], those carrying the minor allele had higher levels of DHA than those with the major allele. When EPA and DHA were measured in RBCs, the results were less consistent than when analyses were performed in plasma or serum [32, 53].

Among the other FADS1 SNPs, 7 studies investigated rs174556 [33, 36, 38, 43, 59,60,61] (Table 1). Only two studies found that individuals carrying the minor (A) allele had lower serum EPA levels than those with the major (T) allele [33, 43]. None of the other studies reported a significant difference between minor and major allele carriers. It is notable that there was a difference in major and minor allele frequencies for this SNP between populations from different countries. For instance, in the Tunisian population, (T) is the major allele [36, 38], whereas in individuals of European descent, (C) is the major allele [43, 60, 61]. Another study of a British cohort listed (A) as a minor allele but did not report the major allele of any of the studied SNPs [33]. In this specific study, the minor allele was associated with lower levels of both EPA and DHA. This shift in the frequency of T and C alleles in rs174556 between ethnicities thus warrants caution when directly comparing studies to draw a clear conclusion about the presence or the absence of relationship with blood EPA and DHA.

Eight studies investigated the rs174547 [2, 35, 41, 53, 56, 59, 61, 62], where (T) was the major allele and (C) the minor allele. Three of the studies investigating this SNP reported that carriers of the major (T) allele had higher DHA levels [2, 41, 59], and two studies reported lower EPA levels in minor allele carriers [2, 41]. However, five studies did not report any significant differences in ω3 LC-PUFA in those carrying the minor or the major allele [35, 53, 56, 61, 62].

FADS1-rs174561 is another SNP in the FADS gene cluster that was investigated in 8 studies. These past studies reported that (T) was the major allele and (C) was the minor allele. Three studies reported lower EPA levels in those carrying the minor (C) allele [33, 42, 63] and two of them reported lower DHA levels [33, 42].

FADS2 gene

Twenty-six SNPs within the FADS2 gene were investigated across 27 studies (Table 1, Fig. 3). Overall, individuals carrying the minor alleles in any of the following 15 SNPs had lower levels of circulating EPA (Fig. 4) or DHA (Fig. 5): rs174570, rs174572, rs174574, rs174575, rs174576, rs174578, rs174579, rs174583, rs174589, rs174602, rs174617, rs2072114, rs99780, rs3834458 and rs498793. 7 SNPs were associated with both EPA and DHA, whereas 5 were associated with EPA only (Fig. 4) and 2 SNPs (rs174575 and rs498793) with DHA only (Fig. 5) [33, 34, 44]. The most widely studied SNPs within the FADS2 gene are rs174575 and rs3834458. These two SNPs are not in high LD (r2=0.552). There were more studies reporting lower DHA levels for minor allele carriers than EPA. Nine studies investigated the rs174575 SNP [34, 44, 52,53,54, 56, 64,65,66], with only two reporting a significant association with DHA [34, 44]. None of the selected studies reported associations between rs174575 and EPA levels.

FADS2 rs498793 was investigated in 5 studies [33, 49, 53, 60, 67] and only Koletzko et al. [33] reported that minor allele carriers (T) had lower levels of DHA. None of the studies found an association with EPA. Finally, rs174574, rs174578, and rs174579 in FADS2 were investigated by a single group [33]. EPA and DHA were lower in minor allele carriers for all these SNPs. rs174572 was investigated by another independent group [49], who did find lower EPA levels in minor allele carriers (T) .

FADS3 gene

Six SNPs in the FADS3 gene were examined across seven studies (Table 1): rs1000778, rs1783175, rs174455 and rs174460, rs174627, rs174468 (Fig. 3). Among these SNPs, only rs174455 and rs174460 were found to be associated with EPA and DHA [33, 52]. These two SNPs were in moderate LD (r2 = 0.746). Minor allele carriers (G) of rs174455 had lower levels of EPA and DHA [33], while in another study [47], they only showed lower levels of EPA. FADS3-rs174460 was only investigated in one paper [51], where minor allele carriers (C) had lower DHA levels but higher EPA levels.

ELOVL genetic polymorphisms and EPA/DHA status in blood pools

Seven different ELOVL polymorphisms were investigated in 7 studies (Table 1). ELOVL2-rs2236212 was in high LD with ELOVL2-rs953413, (R2= 0.9, Fig. 7). Overall, five different SNPs in ELOVL2 were investigated: rs953413, rs3734398, rs2236212, rs3756963, and rs3798713. As for ELOVL5, two studies examined the genetic variants rs2397142 and rs9395855 and their association with blood levels of EPA and DHA. However, neither study reported a difference in blood levels of EPA and DHA between individuals carrying the major and minor alleles of these SNPs [56, 68].

Fig. 7
figure 7

Pairwise linkage disequilibrium D’ and R2 plots of the ELOVL SNPs associated with EPA/DHA in selected studies

Full size image

For ELOVL2, two SNPs were associated with EPA (Fig. 4) and three with DHA (Fig. 5). For rs953413, the individuals carrying the minor (A) allele had significantly lower DHA in both Italian and US cohorts [37]. This was replicated in a UK population [69]. Minor allele carriers of ELOVL2 rs953413 (A) had higher EPA levels and lower DHA levels [37]. Other SNPs (rs3734398 and rs2236212) were investigated and those with the minor allele had lower DHA levels [69]. Finally, in two studies conducted in Tunisia, results on the rs3756963 were divergent, where minor allele carriers (C) had lower EPA levels in the study by Khamlaoui et al., [38] while there was no association found in the study by Hammouda et al., [36]. The study populations varied, with the former study including included obese and normo-weighted individuals, and the latter study including controls and patients with Alzheimer's disease. This difference in study populations may have played a role in the disparate findings observed.

Discussion

In this scoping review we investigated whether EPA and DHA blood levels were modified by polymorphisms in the FADS and ELOVL genes. The objective was to assess whether these genetic variants could account for the observed variations in EPA and DHA levels in the bloodstream.

Hence, the idea was to identify one or two SNPs, and not haplotypes, as they allow for a more focused analysis of specific genetic differences, while haplotypes provide information about the combination of multiple SNPs.

Our results support that more SNPs are associated with EPA blood levels than with DHA. It is notable that many of the SNPs in the FADS gene are in high LD. Furthermore, 3.6 % of the SNPs in FADS genes are missense or nonsense variants (i.e., FADS1- rs174544, rs174545, and rs174546 are missense SNPs) and can thus change the amino acid sequence of desaturases. These SNPs have the potential to affect protein translation by altering the binding of regulatory proteins or microRNAs that control mRNA stability and translation efficiency [70], or they can change the enzymatic activity of the desaturases [43]. This may support, in part, their association with EPA/DHA levels. FADS1- rs174544, rs174545, and rs174546 are also in strong LD with all FADS1 SNPs, except for FADS1-rs174548, where they were in moderate LD with an R2 value between 0.7 - 0.8. These findings are consistent with the conclusions drawn in the review paper, where minor allele carriers, for example of FADS1-rs174544 (A), had lower levels of desaturase products, mainly EPA (Fig. 4).

For the selected studies, some of the SNPs in FADS/ELOVL were significantly associated with higher level of substrates such as linoleic acid, eicosadienoic acid, dihomo-γ linolenic acid and ALA as reported in Schaeffer et al., [63] and lower level of products such as γ-linolenic acid, arachidonic acid, adrenic acid, EPA, docosapentaenoic acid and DHA. Most of these SNPs were in high LD. Therefore, it’s not clear whether one SNP has a dominant role over the others. Indeed, some of these genetic variants are in gene regions that may support their dominant role. For example, this is the case with the FADS1-rs174561 SNP that is located in a cytosine-phosphate-guanine (CpG) island where there is a transcription factor-binding site in the FADS1 gene [63]. It is worth noting that the minor allele in rs174561 is a (C) nucleotide, which may affect the functionality of the CPG island [63]. This is important, since CpG are important sites of methylation in mammals that can influence gene expression [72]. Therefore, a methylated (C) nucleotide in minor allele carriers could result in a transcriptional repression since this epigenetic reaction directly inhibits the binding of certain transcription factors, as confirmed by Hoile et al., 2014 [73]. This group also showed that supplementation with ω3 LC-PUFA changed the methylation status of the CpG island in FADS and ELOVL genes.

Another SNP that was highly studied and associated with ω3 LC-PUFA levels is the FADS1-rs174537 variant. This SNP is also located within a gene region that has been identified as a strong genetic proxy for DNA methylation. Specifically, it is situated in a putative promoter region of the FADS gene cluster. Notably, the methylation status of this locus has the potential to directly impact gene expression [74]. DNA methylation status varied by 40% between homozygotes at rs174537 (44% for GG genotype versus 84% TT genotype), where (T) is the minor allele and (G) is the major allele in this SNP. According to in vitro studies with human hepatocytes, FADS1 metabolism is also allele-specific, depending on the genotype of rs174537. Specifically, the expression of FADS1 and FADS2 genes were significantly reduced in hepatocytes derived from individuals homozygous for the minor allele at FADS1-rs174537 (i.e., TT) [75, 76].

The measure of fatty acids in the blood is an indirect measure of the elongation and desaturation efficiency of the FADS and ELOVL genes. A measure of the actual desaturase activities by measuring enzyme activity would have been more accurate to support the data [57]. Indeed, these blood levels might be influenced by other factors such as ethnicity, sex, diet and physio pathological factors. In addition to investigating blood fatty acids that are more variable than that of other tissues, some teams have investigated the same question in adipose tissues. For example, one study examined associations between FADS SNPs and fatty acid composition of subcutaneous adipose tissue (SAT) [76]. The results have consistently shown that the FADS1- rs174537 genotype is associated with distinct SAT fatty acid profiles. Specifically, individuals carrying the major (G) allele had higher levels of arachidonic acid and lower levels of dihomo-γ-linolenic acid [76]. Similar findings were found by another group that had also demonstrated that minor allele carriers of FADS1- rs174556 (C>T), FADS1- rs2524299(A>T), FADS1/FASD2 intergenic rs3834458 (T>deletion) and FADS2-rs174570 (C>T) had lower levels of EPA in SAT [77]. The advantages of using the adipose tissue as a proxy measure of the conversion rate is that it better captures long-term dietary intakes, since SAT fatty acid turnover is slow, there is an absence of recall bias, and response to conditions of acute disease [76]. Hence, it could be speculated that this tissue is more appropriate to investigate the relationship between FADS and ELOVL polymorphisms and enzymatic activity. However, it is important to outline that EPA and DHA are stored at very low concentrations in the adipose tissue [18]. The role of the adipose tissue is to serve as a reservoir of fat for the body and it therefore does not reflect the dynamic exchange between organs and tissues like the blood.

In this review, we also noticed that allele frequency differed among the populations, likely due to different ethnic backgrounds. For instance, for FADS1 rs174547,(C) was the major allele and (T) the minor allele in 6 studies [35, 53, 56, 59, 61, 62], while in another country (A) was the major and (G) the minor allele [41]. This difference in minor alleles frequencies between populations made it difficult to state that minor allele frequency of this SNP is associated with higher or lower level of EPA and DHA considering the genetic variation between studies. Another factor influencing the levels of blood EPA and DHA is age. Some of the present authors previously showed that with aging, levels of ω3 LC-PUFA, more specifically EPA plasma levels, are higher in older compared to younger individuals [71, 78, 79]. Coltell et al., [2] found that the minor (C) allele of rs174547 was associated with lower serum ω3 LC-PUFA concentrations and they suggested that the age of the participants (from 55 to 75 years old ) could explain why their result differed from that of other groups investigating the same SNP and reporting no association with the EPA or DHA blood levels. We noticed that apart from one study conducted in an older Japanese population (80 y) with high fish intake, the other studies investigated this SNP in participants below the age of 70 y [53, 56, 61, 62]. Hence, the point made here by Coltell et al., suggests that during aging, where levels of EPA are usually higher in older participants compared to younger, carrying the minor allele of rs174547 (C) could reduce the levels of EPA, which in the long term, could increase the risk of cardiovascular disease [9, 10] and cognitive decline [7, 8] as these diseases’ risks are associated with lower EPA or DHA blood levels.

Genetic variations in the FADS and ELOVL genes are factors that can influence the circulating levels of EPA and DHA. However, other factors also play a role in determining the levels of these fatty acids. One important factor is the dietary intake of EPA and DHA, as these fatty acids are primarily obtained through dietary consumption [23]. Additionally, gender has also been identified as a factor modulating the levels of DHA since there are differences in desaturases and elongases enzymes activity between males and females [80]. Kitson et al., 2012 [81] and Extier et al., 2010 [82] both demonstrated higher DHA concentrations in female rats compared to males. Kitson et al.,2012 [81] specifically identified higher expression of desaturase and elongase enzymes in female rats. As compared with male rats, the livers of female rats contained 1.0, 1.4, and 1.1fold higher D5D, D6D and elongase 2 mRNA, respectively. Overall, it might be difficult to dissect the exact contribution of each factors to the plasma level of EPA and DHA hence requiring a better comprehensive understanding of genetic, dietary, and physiological factors to fully understand and predict circulating levels of EPA and DHA.

This scoping review has strengths and limitations. Compared to other reviews on FADS and ELOVL polymorphisms, this review focused specifically on reporting genetic variants associated with ω3 LC-PUFA levels. Another strength of this review paper is that it encompasses a wide range of countries that have conducted research on FADS/ELOVL polymorphisms, providing ample material to draw comprehensive conclusions. Additionally, conducting such reviews is important since it can help identify gene polymorphisms associated with lower circulating ω3 LC-PUFA. Clinical studies can benefit from such findings to directly target the SNPs that are determinant in ω3 LC-PUFA metabolism, and to examine whether there are any interactions between these SNPs, since genes operate more as highly connected networks than independently. This review also has limitations. We decided not to use a checklist (study quality, study bias, confounding and selection bias, power of the study, etc.) to determine the quality of the papers to include in this review for several reasons. First, the number of studies remains quite limited and using a checklist would have removed studies we considered to be important. Second, we noticed that these tools could rank a paper very high in quality despite having serious flaws in their design. Using our judgement in a previous review, we excluded some papers that, with a checklist tool, were ranked very high in quality but had potential fraudulent data [83]. Another limitation of this review is the number of different SNPs in the FADS genes. Indeed, for a same SNP, not all studies had the same minor and major allele. This has complicated our interpretation because we couldn’t pool together all the studies with the same SNP. Moreover, since there is no consensus on the most important SNPs in the FADS genes, each SNP had a limited number of studies, and we included studies with different designs and populations background to be tested.

We also acknowledge that the number of studies investigating the ELOVL polymorphisms is very limited, which impacted our ability to draw conclusions regarding associations between variants in ELOVL genes with EPA and DHA levels.

Conclusions

In this review, we highlighted that there are many SNPs in the FADS genes that are strongly and consistently associated with ω3 LC-PUFA levels. Despite large variability in results, evidence in the literature supports that there are specific SNPs in FADS genes that have strong associations with circulating levels of EPA and DHA. We did find that those carrying the minor allele in the FADS1 rs174537 SNP seem to have consistently lower blood/plasma/serum EPA and DHA levels. This association was generally more consistent for EPA than DHA. Hence, understanding the genetic background is important to target specific EPA/DHA nutritional or supplementation recommendations for individuals, and will therefore have an important role in precision nutrition approaches related to ω3 LC-PUFAs.

Availability of data and materials

A detailed description of the data used to support these findings can be found within the article.

Abbreviations

A:

Adenosine

ALA:

Alpha linolenic acid

CE:

Cholesterol ester

C:

Cytosine

CpG:

Cytosine phosphate guanine

D:

Deletion

DHA:

Docosahexaenoic acid

DNA:

Deoxyribonucleic acid

D6D:

Delta 6 desaturase

D5D:

Delta 5 desaturase

DPA:

Docosapentaenoic acid

EPA:

Eicosapentaenoic acid

ETA:

Eicosatetraenoic acid

ELOVL :

Elongation of very long chain fatty acids

G:

Guanine

LC-PUFA:

Long chain polyunsaturated fatty acids

LD:

Linkage disequilibrium

MAF:

Minor allele frequency

n:

Number of subjects in the study

NCBI:

National center of biotechnology information

PL:

Phospholipids

RBC:

Red blood cells

SNPs:

Single nucleotide polymorphism

STA:

Stearidonic acid

T2D:

Type 2 Diabetes

T:

Thymine

TG:

Triglycerides

References

  1. Leonard AE, Pereira SL, Sprecher H, Huang YS. Elongation of long-chain fatty acids. Prog Lipid Res. 2004;43(1):36–54.

    Article  CAS  PubMed  Google Scholar 

  2. Coltell O, Sorlí JV, Asensio EM, Barragán R, González JI, Giménez-Alba IM, et al. Genome-Wide Association Study for Serum Omega-3 and Omega-6 Polyunsaturated Fatty Acids: Exploratory Analysis of the Sex-Specific Effects and Dietary Modulation in Mediterranean Subjects with Metabolic Syndrome. Nutrients. 2020;12(2):E310.

    Article  Google Scholar 

  3. Merendino N, Costantini L, Manzi L, Molinari R, D’Eliseo D, Velotti F. Dietary ω-3 Polyunsaturated Fatty Acid DHA: A Potential Adjuvant in the Treatment of Cancer. BioMed Res Int. 2013;2013: 310186.

    Article  PubMed  PubMed Central  Google Scholar 

  4. Azrad M, Turgeon C, Demark-Wahnefried W. Current Evidence Linking Polyunsaturated Fatty Acids with Cancer Risk and Progression. Front Oncol. 2013

  5. Bhatt DL, Miller M, Brinton EA, Jacobson TA, Steg PhG, Ketchum SB, et al. REDUCE-IT USA. Circulation. 2020;141(5):367–75.

    Article  PubMed  Google Scholar 

  6. Bu J, Dou Y, Tian X, Wang Z, Chen G. The Role of Omega-3 Polyunsaturated Fatty Acids in Stroke. Oxid Med Cell Longev. 2016;2016:6906712.

    Article  PubMed  PubMed Central  Google Scholar 

  7. Chu CS, Hung CF, Ponnusamy VK, Chen KC, Chen NC. Higher Serum DHA and Slower Cognitive Decline in Patients with Alzheimer’s Disease: Two-Year Follow-Up. Nutrients. 2022;14(6):1159.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Freund-Levi Y, Eriksdotter-Jönhagen M, Cederholm T, Basun H, Faxén-Irving G, Garlind A, et al. Omega-3 fatty acid treatment in 174 patients with mild to moderate Alzheimer disease: OmegAD study: a randomized double-blind trial. Arch Neurol. 2006;63(10):1402–8.

    Article  PubMed  Google Scholar 

  9. Block RC, Harris WS, Reid KJ, Sands SA, Spertus JA. EPA and DHA in blood cell membranes from acute coronary syndrome patients and controls. Atherosclerosis. 2008;197(2):821–8.

    Article  CAS  PubMed  Google Scholar 

  10. Itakura H, Yokoyama M, Matsuzaki M, Saito Y, Origasa H, Ishikawa Y, et al. Relationships between Plasma Fatty Acid Composition and Coronary Artery Disease. J Atheroscler Thromb. 2011;18(2):99–107.

    Article  CAS  PubMed  Google Scholar 

  11. González-Bengtsson A, Asadi A, Gao H, Dahlman-Wright K, Jacobsson A. Estrogen Enhances the Expression of the Polyunsaturated Fatty Acid Elongase Elovl2 via ERα in Breast Cancer Cells. PloS One. 2016;11(10): e0164241.

    Article  PubMed  PubMed Central  Google Scholar 

  12. Wu霞吴义 Y, Wang 烟王 Y, Tian敏田慧 H, Lu逯通 T, Yu苗于 M, Xu慧徐文 W, et al. DHA intake interacts with ELOVL2 and ELOVL5 genetic variants to influence polyunsaturated fatty acids in human milk. J Lipid Res. 2019;60(5):1043‑9.

  13. Ohno Y, Suto S, Yamanaka M, Mizutani Y, Mitsutake S, Igarashi Y, et al. ELOVL1 production of C24 acyl-CoAs is linked to C24 sphingolipid synthesis. Proc Natl Acad Sci. 2010;107(43):18439–44.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Robichaud PP, Munganyiki JE, Boilard E, Surette ME. Polyunsaturated fatty acid elongation and desaturation in activated human T-cells: ELOVL5 is the key elongase. J Lipid Res. 2018;59(12):2383–96.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  15. Pauter AM, Olsson P, Asadi A, Herslöf B, Csikasz RI, Zadravec D, et al. Elovl2 ablation demonstrates that systemic DHA is endogenously produced and is essential for lipid homeostasis in mice. J Lipid Res. 2014;55(4):718–28.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Merino DM, Ma DWL, Mutch DM. Genetic variation in lipid desaturases and its impact on the development of human disease. Lipids Health Dis. 2010;9:63.

    Article  PubMed  PubMed Central  Google Scholar 

  17. Plourde M, Cunnane SC. Extremely limited synthesis of long chain polyunsaturates in adults: implications for their dietary essentiality and use as supplements. Appl Physiol Nutr Metab Physiol Appl Nutr Metab. 2007;32(4):619–34.

    Article  CAS  Google Scholar 

  18. Walker CG, Browning LM, Mander AP, Madden J, West AL, Calder PC, et al. Age and sex differences in the incorporation of EPA and DHA into plasma fractions, cells and adipose tissue in humans. Br J Nutr. 2014;111(4):679–89.

    Article  CAS  PubMed  Google Scholar 

  19. Burdge GC, Wootton SA. Conversion of alpha-linolenic acid to eicosapentaenoic, docosapentaenoic and docosahexaenoic acids in young women. Br J Nutr. 2002;88(4):411–20.

    Article  CAS  PubMed  Google Scholar 

  20. Gerster H. Can adults adequately convert alpha-linolenic acid (18:3n–3) to eicosapentaenoic acid (20:5n–3) and docosahexaenoic acid (22:6n–3)? Int J Vitam Nutr Res Int Z Vitam- Ernahrungsforschung J Int Vitaminol Nutr. 1998;68(3):159–73.

    CAS  Google Scholar 

  21. Harris WS, Pottala JV, Varvel SA, Borowski JJ, Ward JN, McConnell JP. Erythrocyte omega-3 fatty acids increase and linoleic acid decreases with age: observations from 160,000 patients. Prostaglandins Leukot Essent Fatty Acids. 2013;88(4):257–63.

    Article  CAS  PubMed  Google Scholar 

  22. Lanier K, Wisseman B, Strom C, Johnston CA, Isler C, DeVente J, et al. Self-Reported Intake and Circulating EPA and DHA Concentrations in US Pregnant Women. Nutrients. 2023;15(7):1753.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Patterson AC, Chalil A, Aristizabal Henao JJ, Streit IT, Stark KD. Omega-3 polyunsaturated fatty acid blood biomarkers increase linearly in men and women after tightly controlled intakes of 0.25, 0.5, and 1 g/d of EPA + DHA. Nutr Res N Y N. 2015;35(12):1040‑51.

  24. Kim D, Choi JE, Park Y. Low-linoleic acid diet and oestrogen enhance the conversion of α-linolenic acid into DHA through modification of conversion enzymes and transcription factors. Br J Nutr. 2019;121(2):137–45.

    Article  CAS  PubMed  Google Scholar 

  25. Wang S he, Pan Y, Li J, Chen H qin, Zhang H, Chen W, et al. Endogenous omega-3 long-chain fatty acid biosynthesis from alpha-linolenic acid is affected by substrate levels, gene expression, and product inhibition. RSC Adv.2017;7(65):40946‑51.

  26. Home - SNP - NCBI [Internet]. [cité 21 juill 2022]. Disponible sur: https://www.ncbi.nlm.nih.gov/snp/.

  27. Stefl S, Nishi H, Petukh M, Panchenko AR, Alexov E. Molecular Mechanisms of Disease-Causing Missense Mutations. J Mol Biol. 2013;425(21):3919–36.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  28. Brayner B, Kaur G, Keske MA, Livingstone KM. FADS Polymorphism, Omega-3 Fatty Acids and Diabetes Risk: A Systematic Review. Nutrients. 2018;10(6):E758.

    Article  Google Scholar 

  29. Zhang JY, Kothapalli KSD, Brenna JT. Desaturase and elongase-limiting endogenous long-chain polyunsaturated fatty acid biosynthesis. Curr Opin Clin Nutr Metab Care. 2016;19(2):103–10.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  30. Kröger J, Schulze MB. Recent insights into the relation of Δ5 desaturase and Δ6 desaturase activity to the development of type 2 diabetes. Curr Opin Lipidol. 2012;23(1):4–10.

    Article  PubMed  Google Scholar 

  31. Žák A, Jáchymová M, Burda M, Staňková B, Zeman M, Slabý A, et al. FADS Polymorphisms Affect the Clinical and Biochemical Phenotypes of Metabolic Syndrome. Metabolites. 2022;12(6):568.

    Article  PubMed  PubMed Central  Google Scholar 

  32. Roke K, Mutch DM. The role of FADS1/2 polymorphisms on cardiometabolic markers and fatty acid profiles in young adults consuming fish oil supplements. Nutrients. 2014;6(6):2290–304.

    Article  PubMed  PubMed Central  Google Scholar 

  33. Koletzko B, Lattka E, Zeilinger S, Illig T, Steer C. Genetic variants of the fatty acid desaturase gene cluster predict amounts of red blood cell docosahexaenoic and other polyunsaturated fatty acids in pregnant women: findings from the Avon Longitudinal Study of Parents and Children. Am J Clin Nutr. 2011;93(1):211–9.

    Article  CAS  PubMed  Google Scholar 

  34. Harsløf LBS, Larsen LH, Ritz C, Hellgren LI, Michaelsen KF, Vogel U, et al. FADS genotype and diet are important determinants of DHA status: a cross-sectional study in Danish infants. Am J Clin Nutr. 2013;97(6):1403–10.

    Article  PubMed  Google Scholar 

  35. Horiguchi S, Nakayama K, Iwamoto S, Ishijima A, Minezaki T, Baba M, et al. Associations between a fatty acid desaturase gene polymorphism and blood arachidonic acid compositions in Japanese elderly. Prostaglandins Leukot Essent Fatty Acids. 2016;105:9–14.

    Article  CAS  PubMed  Google Scholar 

  36. Hammouda S, Ghzaiel I, Khamlaoui W, Hammami S, Mhenni SY, Samet S, et al. Genetic variants in FADS1 and ELOVL2 increase level of arachidonic acid and the risk of Alzheimer’s disease in the Tunisian population. Prostaglandins Leukot Essent Fatty Acids. 2020;160: 102159.

    Article  CAS  PubMed  Google Scholar 

  37. Tanaka T, Shen J, Abecasis GR, Kisialiou A, Ordovas JM, Guralnik JM, et al. Genome-wide association study of plasma polyunsaturated fatty acids in the InCHIANTI Study. PLoS Genet. 2009;5(1): e1000338.

    Article  PubMed  PubMed Central  Google Scholar 

  38. Khamlaoui W, Mehri S, Hammami S, Hammouda S, Chraeif I, Elosua R, et al. Association Between Genetic Variants in FADS1-FADS2 and ELOVL2 and Obesity, Lipid Traits, and Fatty Acids in Tunisian Population. Clin Appl Thromb Off J Int Acad Clin Appl Thromb. 2020;26:1076029620915286.

    CAS  Google Scholar 

  39. Fujii TM de M, Norde MM, Fisberg RM, Marchioni DML, Ordovás JM, Rogero MM. FADS1 and ELOVL2 polymorphisms reveal associations for differences in lipid metabolism in a cross-sectional population-based survey of Brazilian men and women. Nutr Res N Y N. 2020;78:42‑9.

  40. Schuchardt JP, Köbe T, Witte V, Willers J, Gingrich A, Tesky V, et al. Genetic Variants of the FADS Gene Cluster Are Associated with Erythrocyte Membrane LC PUFA Levels in Patients with Mild Cognitive Impairment. J Nutr Health Aging. 2016;20(6):611–20.

    Article  CAS  PubMed  Google Scholar 

  41. Lu Y, Vaarhorst A, Merry AHH, Dollé MET, Hovenier R, Imholz S, et al. Markers of endogenous desaturase activity and risk of coronary heart disease in the CAREMA cohort study. PloS One. 2012;7(7): e41681.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  42. Al-Hilal M, Alsaleh A, Maniou Z, Lewis FJ, Hall WL, Sanders TAB, et al. Genetic variation at the FADS1-FADS2 gene locus influences delta-5 desaturase activity and LC-PUFA proportions after fish oil supplement. J Lipid Res. 2013;54(2):542–51.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  43. Schaeffer L, Gohlke H, Müller M, Heid IM, Palmer LJ, Kompauer I, et al. Common genetic variants of the FADS1 FADS2 gene cluster and their reconstructed haplotypes are associated with the fatty acid composition in phospholipids. Hum Mol Genet. 2006;15(11):1745–56.

    Article  CAS  PubMed  Google Scholar 

  44. Scholtz SA, Kerling EH, Shaddy DJ, Li S, Thodosoff JM, Colombo J, et al. Docosahexaenoic acid (DHA) supplementation in pregnancy differentially modulates arachidonic acid and DHA status across FADS genotypes in pregnancy. Prostaglandins Leukot Essent Fatty Acids. 2015;94:29–33.

    Article  CAS  PubMed  Google Scholar 

  45. Yao M, Li J, Xie T, He T, Fang L, Shi Y, et al. Polymorphisms of rs174616 in the FADS1-FADS2 gene cluster is associated with a reduced risk of type 2 diabetes mellitus in northern Han Chinese people. Diabetes Res Clin Pract. 2015;109(1):206–12.

    Article  CAS  PubMed  Google Scholar 

  46. Roke K, Jannas-Vela S, Spriet LL, Mutch DM. FADS2 genotype influences whole-body resting fat oxidation in young adult men. Appl Physiol Nutr Metab Physiol Appl Nutr Metab. 2016;41(7):791–4.

    Article  CAS  Google Scholar 

  47. Dumont J, Huybrechts I, Spinneker A, Gottrand F, Grammatikaki E, Bevilacqua N, et al. FADS1 genetic variability interacts with dietary α-linolenic acid intake to affect serum non-HDL-cholesterol concentrations in European adolescents. J Nutr. 2011;141(7):1247–53.

    Article  CAS  PubMed  Google Scholar 

  48. Metelcová T, Vaňková M, Zamrazilová H, Hovhannisyan M, Staňková B, Tvrzická E, et al. FADS1 gene polymorphism(s) and fatty acid composition of serum lipids in adolescents. Lipids. 2021;56(5):499–508.

    Article  PubMed  Google Scholar 

  49. Bokor S, Dumont J, Spinneker A, Gonzalez-Gross M, Nova E, Widhalm K, et al. Single nucleotide polymorphisms in the FADS gene cluster are associated with delta-5 and delta-6 desaturase activities estimated by serum fatty acid ratios. J Lipid Res. 2010;51(8):2325–33.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  50. Baylin A, Ruiz-Narvaez E, Kraft P, Campos H. alpha-Linolenic acid, Delta6-desaturase gene polymorphism, and the risk of nonfatal myocardial infarction. Am J Clin Nutr. 2007;85(2):554–60.

    Article  CAS  PubMed  Google Scholar 

  51. Li SW, Lin K, Ma P, Zhang ZL, Zhou YD, Lu SY, et al. FADS gene polymorphisms confer the risk of coronary artery disease in a Chinese Han population through the altered desaturase activities: based on high-resolution melting analysis. PloS One. 2013;8(1): e55869.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  52. Huang T, Sun J, Chen Y, Xie H, Xu D, Huang J, et al. Genetic variants in desaturase gene, erythrocyte fatty acids, and risk for type 2 diabetes in Chinese Hans. Nutr Burbank Los Angel Cty Calif. 2014;30(7–8):897–902.

    CAS  Google Scholar 

  53. Cribb L, Murphy J, Froud A, Oliver G, Bousman CA, Ng CH, et al. Erythrocyte polyunsaturated fatty acid composition is associated with depression and FADS genotype in Caucasians. Nutr Neurosci. 2018;21(8):589–601.

    Article  CAS  PubMed  Google Scholar 

  54. Kim OY, Lim HH, Yang LI, Chae JS, Lee JH. Fatty acid desaturase (FADS) gene polymorphisms and insulin resistance in association with serum phospholipid polyunsaturated fatty acid composition in healthy Korean men: cross-sectional study. Nutr Metab. 2011;8(1):24.

    Article  CAS  Google Scholar 

  55. Huang MC, Chang WT, Chang HY, Chung HF, Chen FP, Huang YF, et al. FADS Gene Polymorphisms, Fatty Acid Desaturase Activities, and HDL-C in Type 2 Diabetes. Int J Environ Res Public Health. 2017;14(6):572.

    Article  PubMed  PubMed Central  Google Scholar 

  56. de la Garza Puentes A, Montes Goyanes R, ChisaguanoTonato AM, Torres-Espínola FJ, Arias García M, de Almeida L, et al. Association of maternal weight with FADS and ELOVL genetic variants and fatty acid levels- The PREOBE follow-up. PloS One. 2017;12(6): e0179135.

    Article  Google Scholar 

  57. Hong SH, Kwak JH, Paik JK, Chae JS, Lee JH. Association of polymorphisms in FADS gene with age-related changes in serum phospholipid polyunsaturated fatty acids and oxidative stress markers in middle-aged nonobese men. Clin Interv Aging. 2013;8:585–96.

    CAS  PubMed  PubMed Central  Google Scholar 

  58. Murff HJ, Shrubsole MJ, Cai Q, Su T, Dooley JH, Cai SS, et al. N-3 Long Chain Fatty Acids Supplementation, Fatty Acids Desaturase Activity, and Colorectal Cancer Risk: A Randomized Controlled Trial. Nutr Cancer. 2022;74(4):1388–98.

    Article  CAS  PubMed  Google Scholar 

  59. Nita R, Kawabata T, Kagawa Y, Nakayama K, Yanagisawa Y, Iwamoto S, et al. Associations of erythrocyte fatty acid compositions with FADS1 gene polymorphism in Japanese mothers and infants. Prostaglandins Leukot Essent Fatty Acids. 2020;152: 102031.

    Article  CAS  PubMed  Google Scholar 

  60. Malerba G, Schaeffer L, Xumerle L, Klopp N, Trabetti E, Biscuola M, et al. SNPs of the FADS gene cluster are associated with polyunsaturated fatty acids in a cohort of patients with cardiovascular disease. Lipids. 2008;43(4):289–99.

    Article  CAS  PubMed  Google Scholar 

  61. Muzsik A, Bajerska J, Jeleń HH, Gaca A, Chmurzynska A. Associations between fatty acid intake and status, desaturase activities, and FADS gene polymorphism in centrally obese postmenopausal Polish women. Nutrients. 2018;10(8).

  62. Hermant X, Delay C, Flaig A, Luque-Bedregal J, Briand G, Bout MA, et al. Identification of a functional FADS1 3’UTR variant associated with erythrocyte n-6 polyunsaturated fatty acids levels. J Clin Lipidol. 2018;12(5):1280–9.

    Article  PubMed  Google Scholar 

  63. Schaefer EJ, Bongard V, Beiser AS, Lamon-Fava S, Robins SJ, Au R, et al. Plasma phosphatidylcholine docosahexaenoic acid content and risk of dementia and Alzheimer disease: the Framingham Heart Study. Arch Neurol. 2006;63(11):1545–50.

    Article  PubMed  Google Scholar 

  64. Xie L, Innis SM. Genetic variants of the FADS1 FADS2 gene cluster are associated with altered (n-6) and (n-3) essential fatty acids in plasma and erythrocyte phospholipids in women during pregnancy and in breast milk during lactation. J Nutr. 2008;138(11):2222–8.

    Article  CAS  PubMed  Google Scholar 

  65. Carvalho GQ, Pereira-Santos M, Marcon LD, Louro ID, Peluzio MCG, Santos DB. Maternal polymorphisms in the FADS1 and FADS2 genes modify the association between PUFA ingestion and plasma concentrations of omega-3 polyunsaturated fatty acids. Prostaglandins Leukot Essent Fatty Acids. 2019;150:38–46.

    Article  CAS  PubMed  Google Scholar 

  66. Yeates AJ, Love TM, Engström K, Mulhern MS, McSorley EM, Grzesik K, et al. Genetic variation in FADS genes is associated with maternal long-chain PUFA status but not with cognitive development of infants in a high fish-eating observational study. Prostaglandins Leukot Essent Fatty Acids. 2015;102–103:13–20.

    Article  PubMed  Google Scholar 

  67. Bernard JY, Pan H, Aris IM, Moreno-Betancur M, Soh SE, Yap F, et al. Long-chain polyunsaturated fatty acids, gestation duration, and birth size: A Mendelian randomization study using fatty acid desaturase variants. Am J Clin Nutr. 2018;108(1):92–100.

    Article  PubMed  Google Scholar 

  68. Lauritzen L, Hansen HS, Jørgensen MH, Michaelsen KF. The essentiality of long chain n-3 fatty acids in relation to development and function of the brain and retina. Prog Lipid Res. 2001;40(1–2):1–94.

    Article  CAS  PubMed  Google Scholar 

  69. Alsaleh A, Maniou Z, Lewis FJ, Hall WL, Sanders TAB, O’Dell SD. ELOVL2 gene polymorphisms are associated with increases in plasma eicosapentaenoic and docosahexaenoic acid proportions after fish oil supplement. Genes Nutr. 2014;9(1):362.

    Article  PubMed  Google Scholar 

  70. Chen K, Rajewsky N. Natural selection on human microRNA binding sites inferred from SNP data. Nat Genet. 2006;38(12):1452–6.

    Article  CAS  PubMed  Google Scholar 

  71. Plourde M, Chouinard-Watkins R, Vandal M, Zhang Y, Lawrence P, Brenna JT, et al. Plasma incorporation, apparent retroconversion and β-oxidation of 13C-docosahexaenoic acid in the elderly. Nutr Metab. 27 janv 2011;8(1):5.

  72. Zhi D, Aslibekyan S, Irvin MR, Claas SA, Borecki IB, Ordovas JM, et al. SNPs located at CpG sites modulate genome-epigenome interaction. Epigenetics. 2013;8(8):802–6.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  73. Hoile SP, Clarke-Harris R, Huang RC, Calder PC, Mori TA, Beilin LJ, et al. Supplementation with N-3 long-chain polyunsaturated fatty acids or olive oil in men and women with renal disease induces differential changes in the DNA methylation of FADS2 and ELOVL5 in peripheral blood mononuclear cells. PloS One. 2014;9(10): e109896.

    Article  PubMed  PubMed Central  Google Scholar 

  74. Howard TD, Mathias RA, Seeds MC, Herrington DM, Hixson JE, Shimmin LC, et al. DNA methylation in an enhancer region of the FADS cluster is associated with FADS activity in human liver. PloS One. 2014;9(5): e97510.

    Article  PubMed  PubMed Central  Google Scholar 

  75. Kirk LM, Waits CMK, Bashore AC, Dosso B, Meyers AK, Renaldo AC, et al. Exploiting three-dimensional human hepatic constructs to investigate the impact of rs174537 on fatty acid metabolism. PloS One. 2022;17(1): e0262173.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  76. Klingel SL, Valsesia A, Astrup A, Kunesova M, Saris WHM, Langin D, et al. FADS1 genotype is distinguished by human subcutaneous adipose tissue fatty acids, but not inflammatory gene expression. Int J Obes 2005. 2019;43(8):1539‑48.

  77. Aslibekyan S, Jensen MK, Campos H, Linkletter CD, Loucks EB, Ordovas JM, et al. Fatty Acid desaturase gene variants, cardiovascular risk factors, and myocardial infarction in the costa rica study. Front Genet. 2012;3:72.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  78. Vandal M, Freemantle E, Tremblay-Mercier J, Plourde M, Fortier M, Bruneau J, et al. Plasma omega-3 fatty acid response to a fish oil supplement in the healthy elderly. Lipids. 2008;43(11):1085–9.

    Article  CAS  PubMed  Google Scholar 

  79. Chappus-McCendie H, Chevalier L, Roberge C, Plourde M. Omega-3 PUFA metabolism and brain modifications during aging. Prog Neuropsychopharmacol Biol Psychiatry. 2019;94: 109662.

    Article  CAS  PubMed  Google Scholar 

  80. Minihane AM. Impact of Genotype on EPA and DHA Status and Responsiveness to Increased Intakes. Nutrients. 2016;8(3):123.

    Article  PubMed  PubMed Central  Google Scholar 

  81. Kitson AP, Smith TL, Marks KA, Stark KD. Tissue-specific sex differences in docosahexaenoic acid and Δ6-desaturase in rats fed a standard chow diet. Appl Physiol Nutr Metab Physiol Appl Nutr Metab. 2012;37(6):1200–11.

    Article  CAS  Google Scholar 

  82. Extier A, Langelier B, Perruchot MH, Guesnet P, Van Veldhoven PP, Lavialle M, et al. Gender affects liver desaturase expression in a rat model of n-3 fatty acid repletion. J Nutr Biochem. 2010;21(3):180–7.

    Article  CAS  PubMed  Google Scholar 

  83. Andriambelo B, Stiffel M, Roke K, Plourde M. New perspectives on randomized controlled trials with omega-3 fatty acid supplements and cognition: A scoping review. Ageing Res Rev. 2023;85: 101835.

    Article  CAS  PubMed  Google Scholar 

  84. Lauritzen L, Sørensen LB, Harsløf LB, Ritz C, Stark KD, Astrup A, et al. Mendelian randomization shows sex-specific associations between long-chain PUFA-related genotypes and cognitive performance in Danish schoolchildren. Am J Clin Nutr. 2017;106(1):88–95.

    Article  CAS  PubMed  Google Scholar 

  85. Tandon S, Gonzalez-Casanova I, Barraza-Villarreal A, Romieu I, Demmelmair H, Jones DP, et al. Infant Metabolome in Relation to Prenatal DHA Supplementation and Maternal Single-Nucleotide Polymorphism rs174602: Secondary Analysis of a Randomized Controlled Trial in Mexico. J Nutr. 2021;151(11):3339–49.

    Article  PubMed  PubMed Central  Google Scholar 

  86. Zec MM, Stojković L, Zeković M, Pokimica B, Zivkovic M, Stankovic A, et al. FADS2 polymorphisms are associated with plasma arachidonic acid and estimated desaturase-5 activity in a cross-sectional study. Nutr Res. 2020;83:49–62.

    Article  CAS  PubMed  Google Scholar 

  87. Zietemann V, Kröger J, Enzenbach C, Jansen E, Fritsche A, Weikert C, et al. Genetic variation of the FADS1 FADS2 gene cluster and n-6 PUFA composition in erythrocyte membranes in the European Prospective Investigation into Cancer and Nutrition-Potsdam study. Br J Nutr. 2010;104(12):1748–59.

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

This work was supported by the Canadian Institutes of Health Research We would like to thank Rose Bouchard for her help with the bibliographic research for this paper.

Author information

Authors and Affiliations

  1. Research Center on Aging, Health, and Social Sciences Center, Department of Medicine, Sherbrooke University Geriatrics Institute, University of Sherbrooke, Sherbrooke, QC, J1G 1B1, Canada

    Insaf Loukil & Mélanie Plourde

  2. Department de Medicine, Faculty of Medicine and health sciences, University of Sherbrooke, Sherbrooke, QC, J1H 5N4, Canada

    Insaf Loukil & Mélanie Plourde

  3. Department of Human Health and Nutritional Sciences, Guelph, ON, N1G 2W1, Canada

    David M. Mutch

Authors
  1. Insaf Loukil
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. David M. Mutch
    View author publications

    You can also search for this author in PubMed Google Scholar

  3. Mélanie Plourde
    View author publications

    You can also search for this author in PubMed Google Scholar

Contributions

MP designed the review topic. IL conducted the literature search, screened the articles for inclusion, synthesized the data from the selected articles and drafted the manuscript. Paper was then revised by MP and DMM. All authors have reviewed and approved the final version of the manuscript.

Corresponding author

Correspondence to Mélanie Plourde.

Ethics declarations

Competing interests

The authors declare no competing interests.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Loukil, I., Mutch, D.M. & Plourde, M. Genetic association between FADS and ELOVL polymorphisms and the circulating levels of EPA/DHA in humans: a scoping review. Genes Nutr 19, 11 (2024). https://doi.org/10.1186/s12263-024-00747-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1186/s12263-024-00747-4

Keywords

Genes & Nutrition

ISSN: 1865-3499

Contact us